The detailed information of tRNA gene sequence


Sequence ID>WENV170691738
Genome IDLFUF01004544
Search identical group
Phylum/Class[LFUF] hypersaline lake metagenome; virus filtrate of water collected from the Namib Desert Hosabes playa
Species
Start position on genome 2107
End posion on genome 2183
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ataaaacatt
tRNA gene sequence 
GCCGATATAGAATAACGGTTTGAGTTCGCTGGATTCATGTTCCAGAGGTTAGGGTTCGAT
TCCCTATATCGGTACAA
Downstream region at tRNA end position 
aaaataaaga
Secondary structure (Cloverleaf model)
>WENV170691738	Met	CAT
                   t      ACAA aaaataaaga
                     G + T
                     C - G
                     C - G
                     G - C
                     A - T
                     T - A
                     A - T          T T
                    T     A T C C C     A
    G C A A        A      | | | | |     G
  G         T A A G       T A G G G     C
  T         + | | |                 T T
  T         G T T C
    T G A          G     AGGT
                    C - G
                    T - A
                    G - C
                    G - C
                    A - T
                  T       T
                  T       G
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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