The detailed information of tRNA gene sequence


Sequence ID>WENV170691785
Genome IDLFUF01005558
Search identical group
Phylum/Class[LFUF] hypersaline lake metagenome; virus filtrate of water collected from the Namib Desert Hosabes playa
Species
Start position on genome 359
End posion on genome 449
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
gaaaaagaat
tRNA gene sequence 
AGAGGGTAGGCATATGTTGGTTTGATGCGACCGCCTGCTAAGCGGTTGGCTCCGTGATGG
AGTCCGCGAGTTCGATTCTCGTGCCCTCTGCtt
Downstream region at tRNA end position 
aaaggagaaa
Secondary structure (Cloverleaf model)
>WENV170691785	Ser	GCT
                   t      GCtt aaaggagaaa
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     T + G          T T
                    A     T G C T C     A
    T G T A        G      + | | | |     G
  T         T A C G       G C G A G     C
  G         | | | |                 T T
  G         A T G C
    T T T G        G     TGGCTCCGTGATGGAGTCC
                    A - T
                    C - G
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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