The detailed information of tRNA gene sequence


Sequence ID>WENV170691793
Genome IDLFUF01006214
Search identical group
Phylum/Class[LFUF] hypersaline lake metagenome; virus filtrate of water collected from the Namib Desert Hosabes playa
Species
Start position on genome 181
End posion on genome 105
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
actccactaa
tRNA gene sequence 
GGGCTTGTAGCTCAGTTGGTTAGAGCAGAACACTCATAATGTTTGTGTCGTAGGTTCAAG
CCCTACCAAGCCCACTA
Downstream region at tRNA end position 
aaaattgatt
Secondary structure (Cloverleaf model)
>WENV170691793	Met	CAT
                   a      ACTA aaaattgatt
                     G - C
                     G - C
                     G - C
                     C - G
                     T - A
                     T - A
                     G - C          C G
                    T     C A T C C     A
      T G A        A      | | | | |     A
    T       C T C G       G T A G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GTGTC
                    G + T
                    A - T
                    A - T
                    C - G
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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