The detailed information of tRNA gene sequence


Sequence ID>WENV170691812
Genome IDLFUF01006937
Search identical group
Phylum/Class[LFUF] hypersaline lake metagenome; virus filtrate of water collected from the Namib Desert Hosabes playa
Species
Start position on genome 263
End posion on genome 175
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ctgaaaccaa
tRNA gene sequence 
GGAAGGGTGGCAGAGTGGTTTATTGCGCTTGGTTGCTAACCAAGTAGTCCTTAATTGTGA
CTCATGAGTTCGAATCTCATTCCTTCCTCtt
Downstream region at tRNA end position 
tacactatgc
Secondary structure (Cloverleaf model)
>WENV170691812	Ser	GCT
                   a      TCtt tacactatgc
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     G - C
                     G + T          T A
                    T     T A C T C     A
      T G A        G      | | | | |     G
    G       G A C G       A T G A G     C
    G       + | | |                 T T
    T       T T G C
      T T A        G     TAGTCCTTAATTGTGACTC
                    C - G
                    T - A
                    T - A
                    G - C
                    G - C
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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