The detailed information of tRNA gene sequence


Sequence ID>WENV170691849
Genome IDLFUF01009477
Search identical group
Phylum/Class[LFUF] hypersaline lake metagenome; virus filtrate of water collected from the Namib Desert Hosabes playa
Species
Start position on genome 547
End posion on genome 635
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
ctttcttttt
tRNA gene sequence 
GGAGGGTTGGCAGAGTCAGGTAATGTATCGGGCTTGAACCCCGAAGGCTACCGCAAGGTA
GCGCTGGTTCGAATCCAGCACCCTCCGCCn
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>WENV170691849	Ser	TGA
                   t      GCCn nnnnnnnnnn
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     T - A          T A
                    T     C G A C C     A
      T G A        G      | | | | |     G
    C       G A C G       G C T G G     C
    A         | | +                 T T
    G       A T G T
      G T A        A     AGGCTACCGCAAGGTAGC
                    T - A
                    C - G
                    G - C
                    G - C
                    G - C
                  C       C
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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