The detailed information of tRNA gene sequence


Sequence ID>WENV170692144
Genome IDLFUG01020545
Search identical group
Phylum/Class[LFUG] hypersaline lake metagenome; virus filtrate of water collected from the Namib Desert Eisfeld playa
Species
Start position on genome 115
End posion on genome 42
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
ccaaccgcga
tRNA gene sequence 
AGGGGCGTAGCTCAACTGGCAGAGCAGCGGTCTCCAAAACCGCAGGTTGCAGGTTCAAGT
CCTGTCGCCCCTGCtg
Downstream region at tRNA end position 
aaggcgaacg
Secondary structure (Cloverleaf model)
>WENV170692144	Trp	CCA
                   a      GCtg aaggcgaacg
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          T G
                    T     T G T C C     A
      C A A        A      + | | | |     A
    T       C T C G       G C A G G     C
    G       | | | |                 T T
    G       G A G C
      C A          A     AGGTT
                    G - C
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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