The detailed information of tRNA gene sequence


Sequence ID>WENV170692245
Genome IDLGOV01001556
Search identical group
Phylum/Class[LGOV] marine sediment metagenome; sample #5579, elevator 3A push core 41 containing 12 cm of sediment, collected at Hydrate Ridge
Species
Start position on genome 1260
End posion on genome 1334
Amino Acid Thr
Anticodon GGT
Upstream region at tRNA start position 
aaacagaaat
tRNA gene sequence 
GCCCAGATAGCTCAGAGGCAGAGCACTTCCTTGGTAAGGAAGAGGTCGGCGGTTCAATTC
CGCTTCTGGGCTCCA
Downstream region at tRNA end position 
cttgcaatat
Secondary structure (Cloverleaf model)
>WENV170692245	Thr	GGT
                   t      TCCA cttgcaatat
                     G - C
                     C - G
                     C - G
                     C - G
                     A - T
                     G - C
                     A - T          T T
                    T     T C G C C     A
        G A        A      + | | | |     A
      A     C T C G       G G C G G     C
      G     | | | |                 T T
      G     G A G C
        C A        A     AGGTC
                    C - G
                    T - A
                    T - A
                    C - G
                    C - G
                  T       A
                  T       A
                    G G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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