The detailed information of tRNA gene sequence


Sequence ID>WENV170692287
Genome IDLGOV01002185
Search identical group
Phylum/Class[LGOV] marine sediment metagenome; sample #5579, elevator 3A push core 41 containing 12 cm of sediment, collected at Hydrate Ridge
Species
Start position on genome 25012
End posion on genome 24936
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
taactactga
tRNA gene sequence 
GGGCCTATAGCTCAGTTGGTTAGAGCAACCGGCTCATAACCGGTTTGTCCGGGGTTCGAG
TCCCTGTAGGCCCACCA
Downstream region at tRNA end position 
ttaactctta
Secondary structure (Cloverleaf model)
>WENV170692287	Met	CAT
                   a      ACCA ttaactctta
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T - A
                     A - T          T G
                    T     G T C C C     A
      T G A        A      | + | | |     G
    T       C T C G       C G G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     TTGTC
                    A - T
                    C - G
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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