The detailed information of tRNA gene sequence


Sequence ID>WENV170692386
Genome IDLGOV01005028
Search identical group
Phylum/Class[LGOV] marine sediment metagenome; sample #5579, elevator 3A push core 41 containing 12 cm of sediment, collected at Hydrate Ridge
Species
Start position on genome 3265
End posion on genome 3336
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
aaaccctggc
tRNA gene sequence 
GCCAAGGTGGCGGAGCGGCTACGCAATCGCCTGCAGAGCGATACCATTCCGGTTCGAATC
CGGACCTTGGCTtct
Downstream region at tRNA end position 
ttcaaaaatg
Secondary structure (Cloverleaf model)
>WENV170692386	Cys	GCA
                   c      Ttct ttcaaaaatg
                     G - C
                     C - G
                     C - G
                     A - T
                     A - T
                     G - C
                     G - C          T A
                    T     A G G C C     A
        G A        G      | | | | |     G
      C     G G C G       T C C G G     C
      G       | | |                 T T
      G     A C G C
        C T        A     ACCAT
                    A - T
                    T - A
                    C - G
                    G - C
                    C - G
                  C       A
                  T       G
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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