The detailed information of tRNA gene sequence


Sequence ID>WENV170692440
Genome IDLGOV01007583
Search identical group
Phylum/Class[LGOV] marine sediment metagenome; sample #5579, elevator 3A push core 41 containing 12 cm of sediment, collected at Hydrate Ridge
Species
Start position on genome 26902
End posion on genome 26978
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position
ttaaaattat
tRNA gene sequence
GGCGGCGTAGCTCAGTTGGCTAGAGCATACGGTTCATACCCGTAGGGTCAGCGGTTCGAC
TCCGTTCGCCGCTACCA
Downstream region at tRNA end position
taatctaaac
Secondary structure (Cloverleaf model)
>WENV170692440	Met	CAT
                   t      ACCA taatctaaac
                     G + T
                     G - C
                     C - G
                     G - C
                     G - C
                     C - G
                     G - C          T C
                    T     T T G C C     A
      T G A        A      | + | | |     G
    T       C T C G       A G C G G     C
    G       | | | |                 T T
    G       G A G C
      C T A        A     GGGTC
                    T - A
                    A - T
                    C - G
                    G - C
                    G - C
                  T       C
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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