The detailed information of tRNA gene sequence


Sequence ID>WENV170692448
Genome IDLGOV01007722
Search identical group
Phylum/Class[LGOV] marine sediment metagenome; sample #5579, elevator 3A push core 41 containing 12 cm of sediment, collected at Hydrate Ridge
Species
Start position on genome 644
End posion on genome 568
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
cacattctgc
tRNA gene sequence 
GCGGTTGTAGCTCAGCTGGTTAGAGTGCCGGCCTGTCACGCCGGAGGTCGCGGGTTCGAG
TCCCGTCAACCGCGCCA
Downstream region at tRNA end position 
cttttacata
Secondary structure (Cloverleaf model)
>WENV170692448	Asp	GTC
                   c      GCCA cttttacata
                     G - C
                     C - G
                     G - C
                     G - C
                     T - A
                     T - A
                     G - C          T G
                    T     T G C C C     A
      C G A        A      + | | | |     G
    T       C T C G       G C G G G     C
    G       | | | +                 T T
    G       G A G T
      T T A        G     AGGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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