The detailed information of tRNA gene sequence


Sequence ID>WENV170692630
Genome IDLGOV01017532
Search identical group
Phylum/Class[LGOV] marine sediment metagenome; sample #5579, elevator 3A push core 41 containing 12 cm of sediment, collected at Hydrate Ridge
Species
Start position on genome 561
End posion on genome 487
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
ttttttttag
tRNA gene sequence 
GGCGGCATAGCCAAGTGGTAAGGCGCAGGTCTGCAAAACCTTTATCCACCGGTTCAAATC
CGGTTGCCGCCTCCA
Downstream region at tRNA end position 
ttttgcgctc
Secondary structure (Cloverleaf model)
>WENV170692630	Cys	GCA
                   g      TCCA ttttgcgctc
                     G - C
                     G - C
                     C - G
                     G - C
                     G - C
                     C - G
                     A - T          T A
                    T     T G G C C     A
        G A        A      | | | | |     A
      T     A C C G       A C C G G     C
      G       | | |                 T T
      G     A G G C
        T A        G     TATCC
                    C   T
                    A - T
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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