The detailed information of tRNA gene sequence


Sequence ID>WENV170692663
Genome IDLGOV01020465
Search identical group
Phylum/Class[LGOV] marine sediment metagenome; sample #5579, elevator 3A push core 41 containing 12 cm of sediment, collected at Hydrate Ridge
Species
Start position on genome 9149
End posion on genome 9076
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
ttgctctaag
tRNA gene sequence 
GGCCCCGTCGCCAAGTGGTAAGGCAGAGGTCTGCAAAACCTCCATCGCCAGTTCGAATCT
GGCCGGGGCCTCCA
Downstream region at tRNA end position 
aataataaga
Secondary structure (Cloverleaf model)
>WENV170692663	Cys	GCA
                   g      TCCA aataataaga
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     C G G T C     A
        G A        C      | | | | |     G
      T     A C C G       G C C A G     C
      G       | | |                 T T
      G     A G G C
        T A        A     CATC
                    G - C
                    A - T
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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