The detailed information of tRNA gene sequence


Sequence ID>WENV170692731
Genome IDLGOV01024913
Search identical group
Phylum/Class[LGOV] marine sediment metagenome; sample #5579, elevator 3A push core 41 containing 12 cm of sediment, collected at Hydrate Ridge
Species
Start position on genome 261
End posion on genome 337
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
caatttatgc
tRNA gene sequence 
AGGCCAGTAGCTCTAACGGCTAGAGCACCGGACTCCAAATCCGGGTGTTGGGGGTTCGAA
TCCCTCCTGGCCTGCCA
Downstream region at tRNA end position 
ttttttgcat
Secondary structure (Cloverleaf model)
>WENV170692731	Trp	CCA
                   c      GCCA ttttttgcat
                     A - T
                     G - C
                     G - C
                     C - G
                     C - G
                     A - T
                     G - C          T A
                    T     C T C C C     A
      A A T        A      | + | | |     G
    C       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      C T A        A     GTGTT
                    C - G
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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