The detailed information of tRNA gene sequence


Sequence ID>WENV170692753
Genome IDLGOV01026920
Search identical group
Phylum/Class[LGOV] marine sediment metagenome; sample #5579, elevator 3A push core 41 containing 12 cm of sediment, collected at Hydrate Ridge
Species
Start position on genome 561
End posion on genome 635
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
gcttctaagg
tRNA gene sequence 
GGGCCTATAGCTTAGTCAGGTTAGAGCGCCCGGCTCATAACCGGGCGGTCACCGGTTCAA
ATCCGGTTAGGCCCAtaa
Downstream region at tRNA end position 
tgctcaatat
Secondary structure (Cloverleaf model)
>WENV170692753	Met	CAT
                   g      Ataa tgctcaatat
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T - A
                     A - T          T A
                    T     T G G C C     A
    C T G A        A      | | | | |     A
  A         T T C G       A C C G G     C
  G         + | | |                 T T
  G         G A G C
    T T A          G     CGGTC
                    C - G
                    C - G
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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