The detailed information of tRNA gene sequence


Sequence ID>WENV170692780
Genome IDLGOV01029670
Search identical group
Phylum/Class[LGOV] marine sediment metagenome; sample #5579, elevator 3A push core 41 containing 12 cm of sediment, collected at Hydrate Ridge
Species
Start position on genome 526
End posion on genome 452
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
taacaataat
tRNA gene sequence 
GGGCGATTAACTCAGTGGGAGAGTGCTACCTTCACACGGTAGAAGTCACTGGTTCAAATC
CAGTATCGCCTACCA
Downstream region at tRNA end position 
tcccatgaaa
Secondary structure (Cloverleaf model)
>WENV170692780	Val	CAC
                   t      ACCA tcccatgaaa
                     G + T
                     G - C
                     G - C
                     C - G
                     G - C
                     A - T
                     T - A          T A
                    T     T G A C C     A
        G A        A      | | | | |     A
      T     C T C A       A C T G G     C
      G     | | | |                 T T
      G     G A G T
        G A        G     AAGTC
                    C - G
                    T - A
                    A - T
                    C - G
                    C - G
                  T       C
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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