The detailed information of tRNA gene sequence


Sequence ID>WENV170692801
Genome IDLGOV01031772
Search identical group
Phylum/Class[LGOV] marine sediment metagenome; sample #5579, elevator 3A push core 41 containing 12 cm of sediment, collected at Hydrate Ridge
Species
Start position on genome 781
End posion on genome 857
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
aattcaagcc
tRNA gene sequence 
GGGGGATTAGCTCAGCTGGCTAGAGCGCCTGCTTTGCAAGCAGGAGGTCAAGGGTTCGAC
TCCCTTATTCTCCACAA
Downstream region at tRNA end position 
tttggtatta
Secondary structure (Cloverleaf model)
>WENV170692801	Ala	TGC
                   c      ACAA tttggtatta
                     G - C
                     G - C
                     G + T
                     G - C
                     G + T
                     A - T
                     T - A          T C
                    T     T T C C C     A
      C G A        A      | | | | |     G
    T       C T C G       A A G G G     C
    G       | | | |                 T T
    G       G A G C
      C T A        G     AGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  T       A
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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