The detailed information of tRNA gene sequence


Sequence ID>WENV170692803
Genome IDLGOV01032217
Search identical group
Phylum/Class[LGOV] marine sediment metagenome; sample #5579, elevator 3A push core 41 containing 12 cm of sediment, collected at Hydrate Ridge
Species
Start position on genome 228
End posion on genome 300
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
tagtcctatg
tRNA gene sequence 
GGGCTTGTAGATCAGTTGGGAGATCGTCGCCTTTGCAAGGCGAAGGCCCTGGGTTCGAAT
CCCAGCAAGTCCAtac
Downstream region at tRNA end position 
tagtgcacca
Secondary structure (Cloverleaf model)
>WENV170692803	Ala	TGC
                   g      Atac tagtgcacca
                     G - C
                     G - C
                     G + T
                     C - G
                     T - A
                     T - A
                     G - C          T A
                    T     G A C C C     A
      T G A        A      | | | | |     G
    T       C T A G       C T G G G     C
    G       | | | |                 T T
    G       G A T C
      G A          G     AGGCC
                    T - A
                    C - G
                    G - C
                    C - G
                    C - G
                  T       A
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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