The detailed information of tRNA gene sequence


Sequence ID>WENV170692825
Genome IDLGOV01034262
Search identical group
Phylum/Class[LGOV] marine sediment metagenome; sample #5579, elevator 3A push core 41 containing 12 cm of sediment, collected at Hydrate Ridge
Species
Start position on genome 1783
End posion on genome 1708
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position 
tacttgaatc
tRNA gene sequence 
GGTCGCTTAGCTCAGTTGGTAGAGCGCTACCCTTACAAGGTAGATGTCACAAGTTCGAGT
CTTGTAGCGACCACCA
Downstream region at tRNA end position 
tatcaactca
Secondary structure (Cloverleaf model)
>WENV170692825	Val	TAC
                   c      ACCA tatcaactca
                     G - C
                     G - C
                     T - A
                     C - G
                     G - C
                     C - G
                     T - A          T G
                    T     T G T T C     A
      T G A        A      | | | | |     G
    T       C T C G       A C A A G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     ATGTC
                    C - G
                    T - A
                    A - T
                    C - G
                    C - G
                  C       A
                  T       A
                    T A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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