The detailed information of tRNA gene sequence


Sequence ID>WENV170692929
Genome IDLGOV01048153
Search identical group
Phylum/Class[LGOV] marine sediment metagenome; sample #5579, elevator 3A push core 41 containing 12 cm of sediment, collected at Hydrate Ridge
Species
Start position on genome 913
End posion on genome 989
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ttttcattga
tRNA gene sequence 
TGCGGGGTGGAGCAGTATGGTAGCTCGTCGGGCTCATAACCCGAAGGTCAGAGGTTCAAA
TCCTCTCCCCGCTACCA
Downstream region at tRNA end position 
gcatgatatc
Secondary structure (Cloverleaf model)
>WENV170692929	Met	CAT
                   a      ACCA gcatgatatc
                     T   T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     T C T C C     A
      T G A        G      | | | | |     A
    A       C G A G       A G A G G     C
    T       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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