The detailed information of tRNA gene sequence


Sequence ID>WENV170692935
Genome IDLGOV01049278
Search identical group
Phylum/Class[LGOV] marine sediment metagenome; sample #5579, elevator 3A push core 41 containing 12 cm of sediment, collected at Hydrate Ridge
Species
Start position on genome 545
End posion on genome 619
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
gctaaaaggg
tRNA gene sequence 
GGGCCTGTAGCTTAGTCAGGTTAGAGCGCCCGGCTCATAACCGGGCGGTCACCGGTTCAA
ATCCGGTCAGGCCCAtta
Downstream region at tRNA end position 
acttgcaaca
Secondary structure (Cloverleaf model)
>WENV170692935	Met	CAT
                   g      Atta acttgcaaca
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T - A
                     G - C          T A
                    T     T G G C C     A
    C T G A        A      | | | | |     A
  A         T T C G       A C C G G     C
  G         + | | |                 T T
  G         G A G C
    T T A          G     CGGTC
                    C - G
                    C - G
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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