The detailed information of tRNA gene sequence


Sequence ID>WENV170692939
Genome IDLGOV01049428
Search identical group
Phylum/Class[LGOV] marine sediment metagenome; sample #5579, elevator 3A push core 41 containing 12 cm of sediment, collected at Hydrate Ridge
Species
Start position on genome 10552
End posion on genome 10465
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
ttactattgt
tRNA gene sequence 
CGGGAGATGGCAGAGCGGTTGAATGCACTGGTCTTGAAAACCAGCGAGGGTCATACCTCC
GGGAGTTCGAATCTCCCTCTCCCGGCCA
Downstream region at tRNA end position 
tttattttac
Secondary structure (Cloverleaf model)
>WENV170692939	Ser	TGA
                   t      GCCA tttattttac
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C C C T C     A
      C G A        G      | | | | |     G
    G       G A C G       G G G A G     C
    G         | | |                 T T
    T       A T G C
      T G A        A     CGAGGGTCATACCTCC
                    C - G
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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