The detailed information of tRNA gene sequence


Sequence ID>WENV170692994
Genome IDLGOV01058449
Search identical group
Phylum/Class[LGOV] marine sediment metagenome; sample #5579, elevator 3A push core 41 containing 12 cm of sediment, collected at Hydrate Ridge
Species
Start position on genome 30
End posion on genome 118
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
ttttttttta
tRNA gene sequence 
GGAGAGGTACCGAAGTGGTCATAACGGGGCGGTCTTGAAAACCGTTAGGGTGCAAGCCCA
CGAGGGTTCGAATCCCTCCTTCTCCGCCA
Downstream region at tRNA end position 
tatttgcccg
Secondary structure (Cloverleaf model)
>WENV170692994	Ser	TGA
                   a      GCCA tatttgcccg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G + T
                     G - C          T A
                    T     C T C C C     A
    G T G A        A      | | | | |     G
  G         A G C C       G A G G G     C
  T           | | |                 T T
  C         A C G G
    A T A          G     TAGGGTGCAAGCCCAC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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