The detailed information of tRNA gene sequence


Sequence ID>WENV170693019
Genome IDLGOV01063390
Search identical group
Phylum/Class[LGOV] marine sediment metagenome; sample #5579, elevator 3A push core 41 containing 12 cm of sediment, collected at Hydrate Ridge
Species
Start position on genome 1989
End posion on genome 2078
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
acacctcctc
tRNA gene sequence 
GGAGACGTGGCCGAGTGGTCGAAGGCGCTCCCCTGCTAAGGGAGTATACCGGGAACGGTA
TCGAGGGTTCGAATCCCTTCGTCTCCGCCA
Downstream region at tRNA end position 
gagacctttg
Secondary structure (Cloverleaf model)
>WENV170693019	Ser	GCT
                   c      GCCA gagacctttg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     C - G
                     G - C          T A
                    T     T T C C C     A
      T G A        G      + | | | |     G
    G       G C C G       G A G G G     C
    G         | | |                 T T
    T       A G G C
      C G A        G     TATACCGGGAACGGTATC
                    C - G
                    T - A
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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