The detailed information of tRNA gene sequence


Sequence ID>WENV170693043
Genome IDLGOV01069762
Search identical group
Phylum/Class[LGOV] marine sediment metagenome; sample #5579, elevator 3A push core 41 containing 12 cm of sediment, collected at Hydrate Ridge
Species
Start position on genome 990
End posion on genome 1066
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position
agcagcaggt
tRNA gene sequence
CGGGACGTGGCTCAGCCTGGTAGAGCACAGCGTTCGGGACGCTGGGGTCGCTGGTTCAAA
TCCAGTCGTCCCGACCA
Downstream region at tRNA end position
ccagagttgt
Secondary structure (Cloverleaf model)
>WENV170693043	Pro	CGG
                   t      ACCA ccagagttgt
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T
                     C - G
                     G - C          T A
                    T     T G A C C     A
      C G A        G      + | | | |     A
    C       C T C G       G C T G G     C
    T       | | | |                 T T
    G       G A G C
      G T A        A     GGGTC
                    C - G
                    A - T
                    G - C
                    C - G
                    G - C
                  T       A
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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