The detailed information of tRNA gene sequence


Sequence ID>WENV170693104
Genome IDLGOV01085331
Search identical group
Phylum/Class[LGOV] marine sediment metagenome; sample #5579, elevator 3A push core 41 containing 12 cm of sediment, collected at Hydrate Ridge
Species
Start position on genome 349
End posion on genome 424
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
ttaaaaaaaa
tRNA gene sequence 
GGTCCCGTGGTGTAGCGGTTAACATGCCTGACTGTCACTCAGGAGATCGCGAGTTCGATT
CTCGTCGGGACCGCCA
Downstream region at tRNA end position 
ttatcatgcg
Secondary structure (Cloverleaf model)
>WENV170693104	Asp	GTC
                   a      GCCA ttatcatgcg
                     G - C
                     G - C
                     T - A
                     C - G
                     C - G
                     C - G
                     G - C          T T
                    T     T G C T C     A
      C G A        G      + | | | |     G
    G       T G T G       G C G A G     C
    G       | | | +                 T T
    T       A C A T
      T A          G     AGATC
                    C - G
                    C - G
                    T - A
                    G - C
                    A - T
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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