The detailed information of tRNA gene sequence


Sequence ID>WENV170693139
Genome IDLGOV01099659
Search identical group
Phylum/Class[LGOV] marine sediment metagenome; sample #5579, elevator 3A push core 41 containing 12 cm of sediment, collected at Hydrate Ridge
Species
Start position on genome 1528
End posion on genome 1601
Amino Acid Val
Anticodon GAC
Upstream region at tRNA start position 
ctaaagtaca
tRNA gene sequence 
GGGCTCGTGGTCTAGCAGGTCATGACGTCGCCTTGACATGGCGGAGGTCCGGAGTTCGAA
TCTCCGCGGGCCCAtcc
Downstream region at tRNA end position 
tttacttatc
Secondary structure (Cloverleaf model)
>WENV170693139	Val	GAC
                   a      Atcc tttacttatc
                     G - C
                     G - C
                     G - C
                     C - G
                     T + G
                     C - G
                     G - C          T A
                    T     G C C T C     A
      C G A        G      | | | | |     G
    A       T C T G       C G G A G     C
    G         | | |                 T T
    G       T G A C
      T C A        G     AGGTC
                    T + G
                    C - G
                    G - C
                    C - G
                    C - G
                  T       T
                  T       A
                    G A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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