The detailed information of tRNA gene sequence


Sequence ID>WENV170693365
Genome IDLGVC01004695
Search identical group
Phylum/Class[LGVC] marine sediment metagenome; sample #5133, Elevator 3A push core 47, collected at Hydrate Ridge North during Jason II dive
Species
Start position on genome 249
End posion on genome 324
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
aggattatgc
tRNA gene sequence 
AGGCCAGTAGCTCTAACGGTAGAGCGTCGGACTCCAAATCCGGGTGTTGGGGGTTCGAAT
CCCTCCTGGCCTGCCA
Downstream region at tRNA end position 
gtttaattta
Secondary structure (Cloverleaf model)
>WENV170693365	Trp	CCA
                   c      GCCA gtttaattta
                     A - T
                     G - C
                     G - C
                     C - G
                     C - G
                     A - T
                     G - C          T A
                    T     C T C C C     A
      A A T        A      | + | | |     G
    C       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     GTGTT
                    T + G
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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