The detailed information of tRNA gene sequence


Sequence ID>WENV170693391
Genome IDLGVC01006335
Search identical group
Phylum/Class[LGVC] marine sediment metagenome; sample #5133, Elevator 3A push core 47, collected at Hydrate Ridge North during Jason II dive
Species
Start position on genome 173
End posion on genome 249
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
ggacctgaac
tRNA gene sequence 
AGGCCAGTAGCTCTAACGGTTAGAGCACCGGACTCCAAATCCGGGTGCTGGGGGTTCGAA
TCCCTCCTGGCCTGCCA
Downstream region at tRNA end position 
agatattttg
Secondary structure (Cloverleaf model)
>WENV170693391	Trp	CCA
                   c      GCCA agatattttg
                     A - T
                     G - C
                     G - C
                     C - G
                     C - G
                     A - T
                     G - C          T A
                    T     C T C C C     A
      A A T        A      | + | | |     G
    C       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GTGCT
                    C - G
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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