The detailed information of tRNA gene sequence


Sequence ID>WENV170693706
Genome IDLGVC01046693
Search identical group
Phylum/Class[LGVC] marine sediment metagenome; sample #5133, Elevator 3A push core 47, collected at Hydrate Ridge North during Jason II dive
Species
Start position on genome 22
End posion on genome 98
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tcaaaattat
tRNA gene sequence 
GGCGATGTAGCTCAGTCGGTTAGAGCATACGGCTCATATCCGTAGTGTCCGGGGTTCAAC
TCCCTGCATCGCCACCA
Downstream region at tRNA end position 
gcttattttg
Secondary structure (Cloverleaf model)
>WENV170693706	Met	CAT
                   t      ACCA gcttattttg
                     G - C
                     G - C
                     C - G
                     G - C
                     A - T
                     T - A
                     G - C          T C
                    T     G T C C C     A
      T G A        A      | + | | |     A
    C       C T C G       C G G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GTGTC
                    T - A
                    A - T
                    C - G
                    G - C
                    G - C
                  C       T
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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