The detailed information of tRNA gene sequence


Sequence ID>WENV170693781
Genome IDLGVC01066750
Search identical group
Phylum/Class[LGVC] marine sediment metagenome; sample #5133, Elevator 3A push core 47, collected at Hydrate Ridge North during Jason II dive
Species
Start position on genome 87
End posion on genome 162
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
ggatctcagt
tRNA gene sequence 
AGGCCAGTAGCTCTAATGGTAGAGCACCGGACTCCAAATCCGGGAGTTGGGGGTTCGAGT
CCCTCCTGGCCTGCCA
Downstream region at tRNA end position 
ttgtccgtta
Secondary structure (Cloverleaf model)
>WENV170693781	Trp	CCA
                   t      GCCA ttgtccgtta
                     A - T
                     G - C
                     G - C
                     C - G
                     C - G
                     A - T
                     G - C          T G
                    T     C T C C C     A
      A A T        A      | + | | |     G
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GAGTT
                    C - G
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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