The detailed information of tRNA gene sequence


Sequence ID>WENV170693830
Genome IDLGVC01088473
Search identical group
Phylum/Class[LGVC] marine sediment metagenome; sample #5133, Elevator 3A push core 47, collected at Hydrate Ridge North during Jason II dive
Species
Start position on genome 109
End posion on genome 33
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
aataatattg
tRNA gene sequence 
GGGCTTTTAGCTCAGTTGGTCAGAGCGTCCGGCTCATAACCGGCAGGTCCGGGGTTCGAG
TCCCTGAAGGCCCACCA
Downstream region at tRNA end position 
ttattcgccc
Secondary structure (Cloverleaf model)
>WENV170693830	Met	CAT
                   g      ACCA ttattcgccc
                     G - C
                     G - C
                     G - C
                     C - G
                     T + G
                     T - A
                     T - A          T G
                    T     G T C C C     A
      T G A        A      | + | | |     G
    T       C T C G       C G G G G     C
    G       | | | |                 T T
    G       G A G C
      T C A        G     AGGTC
                    T   C
                    C - G
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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