The detailed information of tRNA gene sequence


Sequence ID>WENV170693960
Genome IDLGVD01001854
Search identical group
Phylum/Class[LGVD] marine sediment metagenome; sample #3730, Push core (PC) 16 from cruise R/V Atlantis leg AT-15-68, Alvin dive 4635 at
Species
Start position on genome 5381
End posion on genome 5307
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
gcttccaagg
tRNA gene sequence 
GGGCCTATAGCTTAGTCAGGTTAGAGCGCCCGGCTCATAACCGGGCGGTCACCGGTTCAA
ATCCGGTTAGGCCCAtat
Downstream region at tRNA end position 
cgcctggtat
Secondary structure (Cloverleaf model)
>WENV170693960	Met	CAT
                   g      Atat cgcctggtat
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T - A
                     A - T          T A
                    T     T G G C C     A
    C T G A        A      | | | | |     A
  A         T T C G       A C C G G     C
  G         + | | |                 T T
  G         G A G C
    T T A          G     CGGTC
                    C - G
                    C - G
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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