The detailed information of tRNA gene sequence


Sequence ID>WENV170693978
Genome IDLGVD01002568
Search identical group
Phylum/Class[LGVD] marine sediment metagenome; sample #3730, Push core (PC) 16 from cruise R/V Atlantis leg AT-15-68, Alvin dive 4635 at
Species
Start position on genome 1399
End posion on genome 1323
Amino Acid Phe
Anticodon GAA
Upstream region at tRNA start position 
actctacctT
tRNA gene sequence 
GCCCAGGTAGCTCAGTCTGGGAGAGCGCTGCCCTGAAGAGGCAGTTGTCCCCGGTTCAAA
TCCGGGTCTGGGCATCt
Downstream region at tRNA end position 
attttatcac
Secondary structure (Cloverleaf model)
>WENV170693978	Phe	GAA
                   T      ATCt attttatcac
                     G - C
                     C - G
                     C - G
                     C - G
                     A - T
                     G - C
                     G + T          T A
                    T     G G G C C     A
      T G A        A      | | | | |     A
    C       C T C G       C C C G G     C
    T       | | | |                 T T
    G       G A G C
      G G A        G     TTGTC
                    C - G
                    T - A
                    G - C
                    C - G
                    C - G
                  C       A
                  T       G
                    G A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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