The detailed information of tRNA gene sequence


Sequence ID>WENV170694091
Genome IDLGVD01010666
Search identical group
Phylum/Class[LGVD] marine sediment metagenome; sample #3730, Push core (PC) 16 from cruise R/V Atlantis leg AT-15-68, Alvin dive 4635 at
Species
Start position on genome 2247
End posion on genome 2171
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
ggacctgaac
tRNA gene sequence 
AGGCCAGTAGCTCTAACGGTTAGAGCACCGGACTCCAAATCCGGGTGCTGGGGGTTCGAA
TCCCTCCTGGCCTGCCA
Downstream region at tRNA end position 
agatattttg
Secondary structure (Cloverleaf model)
>WENV170694091	Trp	CCA
                   c      GCCA agatattttg
                     A - T
                     G - C
                     G - C
                     C - G
                     C - G
                     A - T
                     G - C          T A
                    T     C T C C C     A
      A A T        A      | + | | |     G
    C       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GTGCT
                    C - G
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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