The detailed information of tRNA gene sequence


Sequence ID>WENV170694109
Genome IDLGVD01011683
Search identical group
Phylum/Class[LGVD] marine sediment metagenome; sample #3730, Push core (PC) 16 from cruise R/V Atlantis leg AT-15-68, Alvin dive 4635 at
Species
Start position on genome 1293
End posion on genome 1382
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
cttttgcccc
tRNA gene sequence 
GGAGAGTTGCCGGAGTGGTCGAACGGGGCGGTCTCGAACACCGTTGTGGGTGCAAGCCCA
CCCAGGGTTCGAATCCCTGTCTCTCCGCCA
Downstream region at tRNA end position 
gannnnnnnn
Secondary structure (Cloverleaf model)
>WENV170694109	Ser	CGA
                   c      GCCA gannnnnnnn
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     T   T          T A
                    T     G T C C C     A
      T G A        G      | | | | |     G
    G       G G C C       C A G G G     C
    G         | | |                 T T
    T       A C G G
      C G A        G     TGTGGGTGCAAGCCCACC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       C
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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