The detailed information of tRNA gene sequence


Sequence ID>WENV170694115
Genome IDLGVD01012047
Search identical group
Phylum/Class[LGVD] marine sediment metagenome; sample #3730, Push core (PC) 16 from cruise R/V Atlantis leg AT-15-68, Alvin dive 4635 at
Species
Start position on genome 157
End posion on genome 62
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
aaaatagccc
tRNA gene sequence 
GGAGAGGTACCGAAGTGGTCGTAACGGGGTCGACTCGAAATCGATTTGTCCCGTGAATAG
CGGGGCACGTGGGTTCGAATCCCACCCTCTCCGCCA
Downstream region at tRNA end position 
tgtaccatac
Secondary structure (Cloverleaf model)
>WENV170694115	Ser	CGA
                   c      GCCA tgtaccatac
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
    G T G A        A      | | | | |     G
  G         A G C C       G T G G G     C
  T           | | |                 T T
  C         A C G G
    G T A          G     TTGTCCCGTGAATAGCGGGGCAC
                    G + T
                    T - A
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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