The detailed information of tRNA gene sequence


Sequence ID>WENV170694155
Genome IDLGVD01015285
Search identical group
Phylum/Class[LGVD] marine sediment metagenome; sample #3730, Push core (PC) 16 from cruise R/V Atlantis leg AT-15-68, Alvin dive 4635 at
Species
Start position on genome 440
End posion on genome 516
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
taaggagact
tRNA gene sequence 
GGCCGGATGGCGAAGTTGGCTAACGCGGTGGTCTGCAAAACCATTATGCACGGGTTCGAG
TCCCGTTCCGGCCTCCC
Downstream region at tRNA end position 
agtttgttct
Secondary structure (Cloverleaf model)
>WENV170694155	Cys	GCA
                   t      TCCC agtttgttct
                     G - C
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     A - T          T G
                    T     T G C C C     A
      T G A        G      | | | | |     G
    T       A G C G       A C G G G     C
    G         | | |                 T T
    G       A C G C
      C T A        G     TATGC
                    G + T
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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