The detailed information of tRNA gene sequence


Sequence ID>WENV170694378
Genome IDLGVD01042535
Search identical group
Phylum/Class[LGVD] marine sediment metagenome; sample #3730, Push core (PC) 16 from cruise R/V Atlantis leg AT-15-68, Alvin dive 4635 at
Species
Start position on genome 1747
End posion on genome 1821
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
cctacaaaac
tRNA gene sequence 
GGGCGCGTAGCTCAGTTGGTTAGAGCGCACGGTTCACATCCGTGAGGTCGATGGTTCGAG
TCCATTCGCGCCCACtg
Downstream region at tRNA end position 
tcatggaccc
Secondary structure (Cloverleaf model)
>WENV170694378	Val	CAC
                   c      ACtg tcatggaccc
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     C - G
                     G - C          T G
                    T     T T A C C     A
      T G A        A      + | | | |     G
    T       C T C G       G A T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    A - T
                    C - G
                    G - C
                    G - C
                  T       T
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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