The detailed information of tRNA gene sequence


Sequence ID>WENV170694393
Genome IDLGVD01045336
Search identical group
Phylum/Class[LGVD] marine sediment metagenome; sample #3730, Push core (PC) 16 from cruise R/V Atlantis leg AT-15-68, Alvin dive 4635 at
Species
Start position on genome 289
End posion on genome 364
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
ctatatgaac
tRNA gene sequence 
AGGCCAGTAGCTCTAATGGTAGAGCACCGGACTCCAAATCCGGGGGCTGGGGGTTCGAGT
CCCTCCTGGCCTGCCA
Downstream region at tRNA end position 
taacgcgtcg
Secondary structure (Cloverleaf model)
>WENV170694393	Trp	CCA
                   c      GCCA taacgcgtcg
                     A - T
                     G - C
                     G - C
                     C - G
                     C - G
                     A - T
                     G - C          T G
                    T     C T C C C     A
      A A T        A      | + | | |     G
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GGGCT
                    C - G
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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