The detailed information of tRNA gene sequence


Sequence ID>WENV170694457
Genome IDLGVD01060902
Search identical group
Phylum/Class[LGVD] marine sediment metagenome; sample #3730, Push core (PC) 16 from cruise R/V Atlantis leg AT-15-68, Alvin dive 4635 at
Species
Start position on genome 313
End posion on genome 389
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
ttttgtatgc
tRNA gene sequence 
AGGCCAGTAGCTCTAATGGCTAGAGCACCGGTCTCCAAAACCGGGTGTTGGGGGTTCGAG
TCCCTCCTGGCCTGCCA
Downstream region at tRNA end position 
ctttttacgg
Secondary structure (Cloverleaf model)
>WENV170694457	Trp	CCA
                   c      GCCA ctttttacgg
                     A - T
                     G - C
                     G - C
                     C - G
                     C - G
                     A - T
                     G - C          T G
                    T     C T C C C     A
      A A T        A      | + | | |     G
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      C T A        A     GTGTT
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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