The detailed information of tRNA gene sequence


Sequence ID>WENV170694819
Genome IDLGVE01010510
Search identical group
Phylum/Class[LGVE] marine sediment metagenome; combined push core samples #3730, #5133, and #5579 collected at Hydrate Ridge
Species
Start position on genome 2890
End posion on genome 2815
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
ttctgggcac
tRNA gene sequence 
GGGCGGTTAACTCAGTGGTTAGAGTGCCATCCTCACACGGTGGAAGTCACTGGTTCAAAT
CCAGTACCGCCTACCA
Downstream region at tRNA end position 
catataattt
Secondary structure (Cloverleaf model)
>WENV170694819	Val	CAC
                   c      ACCA catataattt
                     G + T
                     G - C
                     G - C
                     C - G
                     G - C
                     G - C
                     T - A          T A
                    T     T G A C C     A
      T G A        A      | | | | |     A
    G       C T C A       A C T G G     C
    G       | | | |                 T T
    T       G A G T
      T A          G     AAGTC
                    C - G
                    C - G
                    A - T
                    T + G
                    C - G
                  C       C
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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