The detailed information of tRNA gene sequence


Sequence ID>WENV170694820
Genome IDLGVE01010520
Search identical group
Phylum/Class[LGVE] marine sediment metagenome; combined push core samples #3730, #5133, and #5579 collected at Hydrate Ridge
Species
Start position on genome 317
End posion on genome 242
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
atgatgatgc
tRNA gene sequence 
AGGCCAGTAGCTCTAACGGTAGAGCGTCGGACTCCAAATCCGGGTGTTGGGGGTTCGAAT
CCCTCCTGGCCTGCCA
Downstream region at tRNA end position 
agtcagcggt
Secondary structure (Cloverleaf model)
>WENV170694820	Trp	CCA
                   c      GCCA agtcagcggt
                     A - T
                     G - C
                     G - C
                     C - G
                     C - G
                     A - T
                     G - C          T A
                    T     C T C C C     A
      A A T        A      | + | | |     G
    C       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     GTGTT
                    T + G
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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