The detailed information of tRNA gene sequence


Sequence ID>WENV170695024
Genome IDLGVE01034118
Search identical group
Phylum/Class[LGVE] marine sediment metagenome; combined push core samples #3730, #5133, and #5579 collected at Hydrate Ridge
Species
Start position on genome 2494
End posion on genome 2420
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
cgtattcgaT
tRNA gene sequence 
GGGCTCGTAGATCAGTTGGAAGATCGCTGCCTTTGCAAGGCAGAGGCCCTGGGTTCGAGT
CCCAGCGGGTCCATaa
Downstream region at tRNA end position 
tgaatgcgaa
Secondary structure (Cloverleaf model)
>WENV170695024	Ala	TGC
                   T      ATaa tgaatgcgaa
                     G - C
                     G - C
                     G + T
                     C - G
                     T + G
                     C - G
                     G - C          T G
                    T     G A C C C     A
      T G A        A      | | | | |     G
    T       C T A G       C T G G G     C
    G       | | | |                 T T
    G       G A T C
      A A          G     AGGCC
                    C - G
                    T - A
                    G - C
                    C - G
                    C - G
                  T       A
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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