The detailed information of tRNA gene sequence


Sequence ID>WENV170695072
Genome IDLGVE01040830
Search identical group
Phylum/Class[LGVE] marine sediment metagenome; combined push core samples #3730, #5133, and #5579 collected at Hydrate Ridge
Species
Start position on genome 486
End posion on genome 560
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
gcttctaagg
tRNA gene sequence 
GGGCCTATAGCTTAGTCAGGTTAGAGCGCCCGGCTCATAACCGGGCGGTCACCGGTTCAA
ATCCGGTTAGGCCCAtat
Downstream region at tRNA end position 
cgccnnnnnn
Secondary structure (Cloverleaf model)
>WENV170695072	Met	CAT
                   g      Atat cgccnnnnnn
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T - A
                     A - T          T A
                    T     T G G C C     A
    C T G A        A      | | | | |     A
  A         T T C G       A C C G G     C
  G         + | | |                 T T
  G         G A G C
    T T A          G     CGGTC
                    C - G
                    C - G
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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