The detailed information of tRNA gene sequence


Sequence ID>WENV170695302
Genome IDLGVE01073287
Search identical group
Phylum/Class[LGVE] marine sediment metagenome; combined push core samples #3730, #5133, and #5579 collected at Hydrate Ridge
Species
Start position on genome 378
End posion on genome 302
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
ctgatagggt
tRNA gene sequence 
AGGCCAGTAGCTCTAATTGGTAGAGCGCCGGACTCCAAATCCGGATGCTGGGGGTTCGAG
TCCCTCCTGGCCTGCCA
Downstream region at tRNA end position 
ttttttattg
Secondary structure (Cloverleaf model)
>WENV170695302	Trp	CCA
                   t      GCCA ttttttattg
                     A - T
                     G - C
                     G - C
                     C - G
                     C - G
                     A - T
                     G - C          T G
                    T     C T C C C     A
      A A T        A      | + | | |     G
    T       C T C G       G G G G G     C
    T       | | | |                 T T
    G       G A G C
      G T A        G     ATGCT
                    C - G
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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