The detailed information of tRNA gene sequence


Sequence ID>WENV170695322
Genome IDLGVE01076081
Search identical group
Phylum/Class[LGVE] marine sediment metagenome; combined push core samples #3730, #5133, and #5579 collected at Hydrate Ridge
Species
Start position on genome 1235
End posion on genome 1319
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
agaccacttC
tRNA gene sequence 
GGAGGAATGGCCGAGTGGTTTAAGGCGGCGGTCTTGAAAACCGTTGTACGAAAGTACCGT
GGGTTCGAATCCTACTTCCTCCGNnn
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>WENV170695322	Ser	TGA
                   C      GNnn nnnnnnnnnn
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     A - T
                     A - T          T A
                    T     C A T C C     A
      T G A        G      | | + | |     G
    G       G C C G       G T G G G     C
    G         | | |                 T T
    T       A G G C
      T T A        G     TGTACGAAAGTACC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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