The detailed information of tRNA gene sequence


Sequence ID>WENV170695411
Genome IDLGVE01087681
Search identical group
Phylum/Class[LGVE] marine sediment metagenome; combined push core samples #3730, #5133, and #5579 collected at Hydrate Ridge
Species
Start position on genome 5979
End posion on genome 5905
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
ttttttttag
tRNA gene sequence 
GGCGGCATAGCCAAGTGGTAAGGCGCAGGTCTGCAAAACCTTTATCCACCGGTTCAAATC
CGGTTGCCGCCTCCA
Downstream region at tRNA end position 
ttttgcgctc
Secondary structure (Cloverleaf model)
>WENV170695411	Cys	GCA
                   g      TCCA ttttgcgctc
                     G - C
                     G - C
                     C - G
                     G - C
                     G - C
                     C - G
                     A - T          T A
                    T     T G G C C     A
        G A        A      | | | | |     A
      T     A C C G       A C C G G     C
      G       | | |                 T T
      G     A G G C
        T A        G     TATCC
                    C   T
                    A - T
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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