The detailed information of tRNA gene sequence


Sequence ID>WENV170695564
Genome IDLGVE01121882
Search identical group
Phylum/Class[LGVE] marine sediment metagenome; combined push core samples #3730, #5133, and #5579 collected at Hydrate Ridge
Species
Start position on genome 354
End posion on genome 449
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
aaaatagccc
tRNA gene sequence 
GGAGAGGTACCGAAGTGGTCGTAACGGGGTCGACTCGAAATCGATTTGTCCCGTGAATAG
CGGGGCACGTGGGTTCGAATCCCACCCTCTCCGCCA
Downstream region at tRNA end position 
gaatacagac
Secondary structure (Cloverleaf model)
>WENV170695564	Ser	CGA
                   c      GCCA gaatacagac
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
    G T G A        A      | | | | |     G
  G         A G C C       G T G G G     C
  T           | | |                 T T
  C         A C G G
    G T A          G     TTGTCCCGTGAATAGCGGGGCAC
                    G + T
                    T - A
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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