The detailed information of tRNA gene sequence


Sequence ID>WENV170695607
Genome IDLGVE01130041
Search identical group
Phylum/Class[LGVE] marine sediment metagenome; combined push core samples #3730, #5133, and #5579 collected at Hydrate Ridge
Species
Start position on genome 1183
End posion on genome 1111
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
tagtcctatg
tRNA gene sequence 
GGGCTTGTAGATCAGTTGGGAGATCGTCGCCTTTGCAAGGCGAAGGCCCTGGGTTCGAAT
CCCAGCAAGTCCAtac
Downstream region at tRNA end position 
tagtgcacca
Secondary structure (Cloverleaf model)
>WENV170695607	Ala	TGC
                   g      Atac tagtgcacca
                     G - C
                     G - C
                     G + T
                     C - G
                     T - A
                     T - A
                     G - C          T A
                    T     G A C C C     A
      T G A        A      | | | | |     G
    T       C T A G       C T G G G     C
    G       | | | |                 T T
    G       G A T C
      G A          G     AGGCC
                    T - A
                    C - G
                    G - C
                    C - G
                    C - G
                  T       A
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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